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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015950642.1_cds_XP_016491013.1_81377
CDS Infomation

[gene=LOC107810716] [db_xref=GeneID:107810716] [protein=SPX domain-containing membrane protein At4g22990-like] [protein_id=XP_016491013.1] [location=complement(join(2054..2292,2377..2510,2966..3156,3757..3941,4826..5127,5717..6171,6857..6961,7189..7500,7946..8066,8894..8946))] [gbkey=CDS]
Sequence

ATGGTTGCCTTCGGAAAAAAGTTGAAAGAAACACAAATTCAAGAATGGCAAGGATATTAC
ATCAACTACAAGTTGATGAAGAAGAAAGTAAAGCAGTATGTGCAGCAGATTGAAGTTTCT
GAACAAAGCCGCGAGTATGCTCTCAAGGACTTCTCAAAGATTTTAGATAAGCAGATTGAA
AAGATTGTTTTGTTCCTGTTGGAACAACAAGGGAAACTGGCAAGTACGCTATCCATGCTT
GGGCAAGAACATGATGTCCTGATACAGCAACAAGATGGTTCAAAATTATCCCAACTACAA
CAGTCATATGTAGAAGTAGGCAGAGAACTGCTACGACTTCTCGTTTTTGTTGAAATGAAT
GCCATTGGTGTGCGCAAGATACTGAAAAAGTTTGACAAGAGATGTGAGCATAAATTCACT
AATTACTATGTCAAGTCTCGAGCAAATCATCCTTATTCCCAGTTGAGACAAATATTTAAG
CATGTGGGCATTTCCGCTGTAGTTGGAACCATATCCCGCAATCTTGCGGATCTCCAAGAG
AACCGTGCGAGCTATATTTCAATATATGATCAGCCTGCTCTTCCACTTCCGGACCCTATC
ATCGAAGCTATTAATCAAGCAGTGGATAGACTAACAAATTCAACTGATTTCCTTCACTAT
TTGGGAAAACATGCACTTATTTCACCACAAGAACTACCAACTCCTTCCAAGGATCATGCT
GCCGCTGAGAGATATCACTTGATGTCACTTCTGTTGAACTTGGCTAATGCATTCTTGTAT
ATGGTTAACACATATATAATAGTCCCAACAGCAGATGACTACTCTTTGAGTCTTGGAGCT
GCAGCAACTGTTTGTGGAGCTGTGATTGGGTCTATGGCTGTTGCTCAGGTGTTCTCTTCA
GTATATTTTAGTGCATGGTCCAATAAATCCTACATGAAGCCTCTTGTATTCAGCAGCATT
GTCCTTCTTATTGGGAATACCTTATATGCCCTGGCTTATGATTTCAATTCGATATACTTA
CTTCTAATCGGACGCCTATTTTGTGGGCTTGGTTCGGCAAGGGCAGTTAATAGGCGGTAT
ATCAGCGATTGTGTTCCTCTGCACTTGCGAATGAAGGCTTCGGCTGGTTTTGTAAGTGCA
AGTGCACTTGGAATGGCATGTGGTCCGGCTGTTGCCTGCTTGCTTCAAACTAACTTTAAG
TTCATGAAGATCACTTTTAACCAAGACACTTTACCAGGATGGATAATGGCTCTTGCATGG
TTTCTTTACCTATTATGCGTGTGGACTTCCTTTAGAGAACCTGCAAAAGAGGAAATGGTG
AATGTTCTGCCACAAAAATCCAATAGCGGGCAGATTGAAAATGGTTTAGTACAGAATGGT
ATTTCCCAGCCACTTCTTTTAACTGCAGAGGAGAAGCAACAAGATGACGATGAAGACCAA
GATTGCGATAATAGTGAAGAATCTGCAGAGGAGATCCAAAAACCTGTTACTTCCATAGTC
TCTGCTTATAAGCTGCTTACCCCATCCGTGAAGGTTCAACTGCTCATATACTTTATGCTG
AAGTATGCAATGGAGATTTTACTTGCTGAATCAAGTGTTGTCACCACATACTACTTCATA
TGGTCAACGAGCAATGTGGCCATTTTTCTTGCATGTCTTGGGCTGACTGTCCTTCCGGTG
AACATTCTTGTTGGGAGCTACCTCAACAACATGTTTGAGGAGAGGCAAGTTTTGCTAGCA
TCAGAAATCTTGGTATGCTTGGGAATAGTTCTGAGTTTCCAAGTCATAATCCCTTATTCT
GTACCACAATATGTCTGTTCAGCTCTAATCACATTTGTAGCTGCTGAAGTACTCGAAGGC
GTTAACCTTAACCTTCTATCTCGAGTCATGTCTTCGAGGCTTACTAAAGGAACGTATAAT
GGTGGACTACTTTCAACAGAAGCCGGAACTTTAGCTCGAGTATTTGCAGATAGTACAATA
ACCTTGGCAGGATACTGGGGAATGAGTAGGCTTTTGAATGTGACACTGCTACCTTCACTA
TTTATCTGCATCTTCTCCATCATAGCCACCTGCTTCACTTATAATTCTCTCTATTGA

Peptide Sequence

PEP ID

XP_016491013.1
PEP Infomation

PREDICTED: SPX domain-containing membrane protein At4g22990-like [Nicotiana tabacum]
Sequence

MVAFGKKLKETQIQEWQGYYINYKLMKKKVKQYVQQIEVSEQSREYALKDFSKILDKQIE
KIVLFLLEQQGKLASTLSMLGQEHDVLIQQQDGSKLSQLQQSYVEVGRELLRLLVFVEMN
AIGVRKILKKFDKRCEHKFTNYYVKSRANHPYSQLRQIFKHVGISAVVGTISRNLADLQE
NRASYISIYDQPALPLPDPIIEAINQAVDRLTNSTDFLHYLGKHALISPQELPTPSKDHA
AAERYHLMSLLLNLANAFLYMVNTYIIVPTADDYSLSLGAAATVCGAVIGSMAVAQVFSS
VYFSAWSNKSYMKPLVFSSIVLLIGNTLYALAYDFNSIYLLLIGRLFCGLGSARAVNRRY
ISDCVPLHLRMKASAGFVSASALGMACGPAVACLLQTNFKFMKITFNQDTLPGWIMALAW
FLYLLCVWTSFREPAKEEMVNVLPQKSNSGQIENGLVQNGISQPLLLTAEEKQQDDDEDQ
DCDNSEESAEEIQKPVTSIVSAYKLLTPSVKVQLLIYFMLKYAMEILLAESSVVTTYYFI
WSTSNVAIFLACLGLTVLPVNILVGSYLNNMFEERQVLLASEILVCLGIVLSFQVIIPYS
VPQYVCSALITFVAAEVLEGVNLNLLSRVMSSRLTKGTYNGGLLSTEAGTLARVFADSTI
TLAGYWGMSRLLNVTLLPSLFICIFSIIATCFTYNSLY

Transcript Sequence

Gene sequence data has not been registered.